Publications

2018

Book chapters

Krysiak-baltyn, K.; Martin, GJO.; Gras, SL. (2018) “Computational modeling of bacteriophage production for process optimization”. Methods in Molecular Biology. pp: 195-218. DOI:10.1007/978-1-4939-7395-8_16

Journal articles

D'incecco, P.; Ong, L.; Gras, S.; Pellegrino, L. (2018) “A fluorescence in situ staining method for investigating spores and vegetative cells of Clostridia by confocal laser scanning microscopy and structured illuminated microscopy” Micron PERGAMON-ELSEVIER SCIENCE LTD. pp: 1-9. DOI:10.1016/j.micron.2018.04.005

D'incecco, P.; Ong, L.; Pellegrino, L.; Faoro, F.; Barbiroli, A.; Gras, S. (2018) “Effect of temperature on the microstructure of fat globules and the immunoglobulin-mediated interactions between fat and bacteria in natural raw milk creaming” Journal of dairy science pp: 2984-2997. DOI:10.3168/jds.2017-13580

Krysiak-baltyn, K.; Martin, GJO.; Gras, SL. (2018) “Computational modelling of large scale phage production using a two-stage batch process” Pharmaceuticals (Basel, Switzerland) MDPI AG. DOI:10.3390/ph11020031

Ong, L.; Kentish, SE.; Gras, SL. (2018) “Small scale production of cream cheese: A comparison of batch centrifugation and cloth bag methods” International Dairy Journal ELSEVIER SCI LTD. pp: 42-52. DOI:10.1016/j.idairyj.2018.01.008

Yu, L.; Zheng, Y.; Xu, J.; Qu, F.; Lin, Y.; Zou, Y.; Yang, Y.; Gras, SL.; Wang, C. (2018) “Site-specific determination of TTR-related functional peptides by using scanning tunneling microscopy” Nano Research TSINGHUA UNIV PRESS. pp: 577-585. DOI:10.1007/s12274-017-1825-7

Conference Papers

Vongsvivut, J.; Truong, VK.; Hameed, N.; Beattie, DA.; Krasowska, M.; Gras, S.; Watson, GS.; Watson, JA.; Perez-guaita, D.; Heraud, P.; Wood, BR.; Morikawa, J.; Juodkazis, S.; Ivanova, EP.; Tobin, MJ. (2018) “Recent advances in macro ATR-FTIR microspectroscopic technique for high resolution surface characterisation at Australian Synchrotron IR Beamline” DOI:10.1364/MICS.2018.MT3C.5

2017

Book chapters

Raynes, JK.; Gras, S.; Carver, JA.; Gerrard, JA. (2017) “Artificial Nanostructures in Food”. Axelos, MAV.; Van De Voorde, M. (Ed.) Nanotechnology in Agriculture and Food Science. Weinheim, Germany. Wiley-VCH Verlag. pp: 49-68.

Journal articles

Burger, W.; Krysiak-baltyn, K.; Scales, PJ.; Martin, GJO.; Stickland, AD.; Gras, SL. (2017) “The influence of protruding filamentous bacteria on floc stability and solid-liquid separation in the activated sludge process” Water Research PERGAMON-ELSEVIER SCIENCE LTD. pp: 578-585. DOI:10.1016/j.watres.2017.06.063

Chen, R.; Zhang, L.; Li, X.; Ong, L.; Soe, YG.; Sinsua, N.; Gras, SL.; Tabor, RF.; Wang, X.; Shen, W. (2017) “Trace Analysis and Chemical Identification on Cellulose Nanofibers-Textured SERS Substrates Using the "Coffee Ring" Effect” ACS Sensors AMER CHEMICAL SOC. pp: 1060-1067. DOI:10.1021/acssensors.7b00403

Deng, H.; Chen, GQ.; Gras, SL.; Kentish, SE. (2017) “The effect of restriction membranes on mass transfer in an electrodialysis with filtration membrane process” Journal of Membrane Science ELSEVIER SCIENCE BV. pp: 429-436. DOI:10.1016/j.memsci.2016.12.054

Dokouhaki, M.; Hung, A.; Day, L.; Gras, SL. (2017) “The pH-dependent assembly of Chaplin E from Streptomyces coelicolor” Journal of Structural Biology ACADEMIC PRESS INC ELSEVIER SCIENCE. pp: 82-91. DOI:10.1016/j.jsb.2017.04.004

Dokouhaki, M.; Hung, A.; Prime, EL.; Qiao, GG.; Day, L.; Gras, SL. (2017) “pH-Induced interfacial properties of Chaplin E from Streptomyces coelicolor” Colloids and Surfaces B: Biointerfaces ELSEVIER SCIENCE BV. pp: 589-597. DOI:10.1016/j.colsurfb.2017.10.006

Dokouhaki, M.; Prime, EL.; Hung, A.; Qiao, GG.; Day, L.; Gras, SL. (2017) “Structure-Dependent Interfacial Properties of Chaplin F from Streptomyces coelicolor” Biomolecules MDPI AG. pp: -. DOI:10.3390/biom7030068

Freidman, BL.; Gras, SL.; Snape, I.; Stevens, GW.; Mumford, KA. (2017) “A bio-reactive barrier sequence for petroleum hydrocarbon capture and degradation in low nutrient environments” International Biodeterioration & Biodegradation ELSEVIER SCI LTD. pp: 26-37. DOI:10.1016/j.ibiod.2016.09.025

Freidman, BL.; Northcott, KA.; Thiel, P.; Gras, SL.; Snape, I.; Stevens, GW.; Mumford, KA. (2017) “From urban municipalities to polar bioremediation: the characterisation and contribution of biogenic minerals for water treatment” Journal of Water and Health IWA PUBLISHING. pp: 385-401. DOI:10.2166/wh.2017.019

Freidman, BL.; Speirs, LBM.; Churchill, J.; Gras, SL.; Tucci, J.; Snape, I.; Stevens, GW.; Mumford, KA. (2017) “Biofilm communities and biodegradation within permeable reactive barriers at fuel spill sites in Antarctica” International Biodeterioration & Biodegradation ELSEVIER SCI LTD. pp: 45-53. DOI:10.1016/j.ibiod.2017.08.008

Freidman, BL.; Terry, D.; Wilkins, D.; Spedding, T.; Gras, SL.; Snape, I.; Stevens, GW.; Mumford, KA. (2017) “Permeable bio-reactive barriers to address petroleum hydrocarbon contamination at subantarctic Macquarie Island” Chemosphere PERGAMON-ELSEVIER SCIENCE LTD. pp: 408-420. DOI:10.1016/j.chemosphere.2017.01.127

Kezia, K.; Lee, J.; Zisu, B.; Chen, GQ.; Gras, SL.; Kentish, SE. (2017) “Solubility of Calcium Phosphate in Concentrated Dairy Effluent Brines” Journal of Agricultural and Food Chemistry AMER CHEMICAL SOC. pp: 4027-4034. DOI:10.1021/acs.jafc.6b05792

Krysiak-baltyn, K.; Martin, GJO.; Stickland, AD.; Scales, PJ.; Gras, SL. (2017) “Simulation of phage dynamics in multi-reactor models of complex wastewater treatment systems” Biochemical Engineering Journal ELSEVIER SCIENCE BV. pp: 91-102. DOI:10.1016/j.bej.2016.10.011

Nguyen, HTH.; Ong, L.; Hoque, A.; Kentish, SE.; Williamson, N.; Ang, C-S.; Gras, SL. (2017) “A proteomic characterization shows differences in the milk fat globule membrane of buffalo and bovine milk” Food Bioscience ELSEVIER SCIENCE BV. pp: 7-16. DOI:10.1016/j.fbio.2017.05.004

Nguyen, HTH.; Ong, L.; Lopez, C.; Kentish, SE.; Gras, SL. (2017) “Microstructure and physicochemical properties reveal differences between high moisture buffalo and bovine Mozzarella cheeses” Food Research International ELSEVIER SCIENCE BV. pp: 458-467. DOI:10.1016/j.foodres.2017.09.032

Ramdzan, YM.; Trubetskov, MM.; Ormsby, AR.; Newcombe, EA.; Sui, X.; Tobin, MJ.; Bongiovanni, MN.; Gras, SL.; Dewson, G.; Miller, JML.; Finkbeiner, S.; Moily, NS.; Niclis, J.; Parish, CL.; Purcell, AW.; Baker, MJ.; Wilce, JA.; Waris, S.; Stojanovski, D.; Bocking, T.; Ang, C-S.; Ascher, DB.; Reid, GE.; Hatters, DM. (2017) “Huntingtin Inclusions Trigger Cellular Quiescence, Deactivate Apoptosis, and Lead to Delayed Necrosis” Cell Reports CELL PRESS. pp: 919-927. DOI:10.1016/j.celrep.2017.04.029

Sayanjali, S.; Ying, D.; Sanguansri, L.; Buckow, R.; Augustin, MA.; Gras, SL. (2017) “The effect of extrusion on the functional properties of oat fibre” LWT - Food Science and Technology ELSEVIER SCIENCE BV. pp: 106-113. DOI:10.1016/j.lwt.2017.05.025

Soodam, K.; Ong, L.; Powell, IB.; Kentish, SE.; Gras, SL. (2017) “Effect of elevated temperature on the microstructure of full fat Cheddar cheese during ripening” Food Structure pp: 8-16. DOI:10.1016/j.foostr.2017.05.003

Van T'hag, L.; Gras, SL.; Conn, CE.; Drummond, CJ. (2017) “Lyotropic liquid crystal engineering moving beyond binary compositional space - ordered nanostructured amphiphile self-assembly materials by design” Chem. Soc. Rev. ROYAL SOC CHEMISTRY. pp: 2705-2731. DOI:10.1039/c6cs00663a

Van't Hag, L.; Anandan, A.; Seabrook, SA.; Gras, SL.; Drummond, CJ.; Vrielink, A.; Conn, CE. (2017) “Direct demonstration of lipid phosphorylation in the lipid bilayer of the biomimetic bicontinuous cubic phase using the confined enzyme lipid A phosphoethanolamine transferase” Soft Matter ROYAL SOC CHEMISTRY. pp: 1493-1504. DOI:10.1039/c6sm02487d

Yang, W.; Willemse, J.; Sawyer, EB.; Lou, F.; Gong, W.; Zhang, H.; Gras, SL.; Claessen, D.; Perrett, S. (2017) “The propensity of the bacterial rodlin protein RdlB to form amyloid fibrils determines its function in Streptomyces coelicolor” Scientific Reports NATURE PUBLISHING GROUP. pp: -. DOI:10.1038/srep42867

2016

Journal articles

Chandrapala, J.; Ong, L.; Zisu, B.; Gras, SL.; Ashokkumar, M.; Kentish, SE. (2016) “The effect of sonication and high pressure homogenisation on the properties of pure cream” Innovative Food Science & Emerging Technologies ELSEVIER SCI LTD. pp: 298-307. DOI:10.1016/j.ifset.2015.11.023

Chen, GQ.; Eschbach, FII.; Weeks, M.; Gras, SL.; Kentish, SE. (2016) “Removal of lactic acid from acid whey using electrodialysis” Separation and Purification Technology ELSEVIER SCIENCE BV. pp: 230-237. DOI:10.1016/j.seppur.2015.12.016

Freidman, BL.; Gras, SL.; Snape, I.; Stevens, GW.; Mumford, KA. (2016) “The performance of ammonium exchanged zeolite for the biodegradation of petroleum hydrocarbons migrating in soil water” Journal of Hazardous Materials ELSEVIER SCIENCE BV. pp: 272-282. DOI:10.1016/j.jhazmat.2016.03.095

Freidman, BL.; Gras, SL.; Snape, I.; Stevens, GW.; Mumford, KA. (2016) “Effects of Freeze-Thaw Phenomena on Controlled Nutrient Release: Application to Bioremediation” CLEAN - Soil, Air, Water WILEY-BLACKWELL. pp: 1739-1749. DOI:10.1002/clen.201600162

Freidman, BL.; Gras, SL.; Snape, I.; Stevens, GW.; Mumford, KA. (2016) “Application of controlled nutrient release to permeable reactive barriers” Journal of Environmental Management ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD. pp: 145-154. DOI:10.1016/j.jenvman.2015.12.002

Kezia, K.; Lee, J.; Zisu, B.; Weeks, M.; Chen, G.; Gras, S.; Kentish, S. (2016) “Crystallisation of minerals from concentrated saline dairy effluent” Water Research PERGAMON-ELSEVIER SCIENCE LTD. pp: 300-308. DOI:10.1016/j.watres.2016.05.074

Krysiak-baltyn, K.; Martin, GJO.; Stickland, AD.; Scales, PJ.; Gras, SL. (2016) “Computational models of populations of bacteria and lytic phage” Critical Reviews in Microbiology TAYLOR & FRANCIS LTD. pp: 942-968. DOI:10.3109/1040841X.2015.1114466

Li, X.; Burger, S.; O'connor, AJ.; Ong, L.; Karas, JA.; Gras, SL. (2016) “An enzyme-responsive controlled release system based on a dual-functional peptide” Chem. Commun. ROYAL SOC CHEMISTRY. pp: 5112-5115. DOI:10.1039/c5cc10480g

Nguyen, HTH.; Madec, M-N.; Ong, L.; Kentish, SE.; Gras, SL.; Lopez, C. (2016) “The dynamics of the biological membrane surrounding the buffalo milk fat globule investigated as a function of temperature” Food Chemistry ELSEVIER SCI LTD. pp: 343-351. DOI:10.1016/j.foodchem.2016.02.141

Van 't Hag, L.; De Campo, L.; Garvey, CJ.; Feast, GC.; Leung, AE.; Yepuri, NR.; Knott, R.; Greaves, TL.; Nhiem, T.; Gras, SL.; Drummond, CJ.; Conn, CE. (2016) “Using SANS with Contrast-Matched Lipid Bicontinuous Cubic Phases To Determine the Location of Encapsulated Peptides, Proteins, and Other Biomolecules” The Journal of Physical Chemistry Letters AMER CHEMICAL SOC. pp: 2862-2866. DOI:10.1021/acs.jpclett.6b01173

Van 't Hag, L.; Knoblich, K.; Seabrook, SA.; Kirby, NM.; Mudie, ST.; Lau, D.; Li, X.; Gras, SL.; Mulet, X.; Call, ME.; Call, MJ.; Drummond, CJ.; Conn, CE. (2016) “Exploring the in meso crystallization mechanism by characterizing the lipid mesophase microenvironment during the growth of single transmembrane alpha-helical peptide crystals” Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences ROYAL SOC. pp: -. DOI:10.1098/rsta.2015.0125

Van 't Hag, L.; Li, X.; Meikle, TG.; Hoffmann, SV.; Jones, NC.; Pedersen, JS.; Hawley, AM.; Gras, SL.; Conn, CE.; Drummond, CJ. (2016) “How Peptide Molecular Structure and Charge Influence the Nanostructure of Lipid Bicontinuous Cubic Mesophases: Model Synthetic WALP Peptides Provide Insights” Langmuir AMER CHEMICAL SOC. pp: 6882-6894. DOI:10.1021/acs.langmuir.6b01058

Van't Hag, L.; Shen, H-H.; Lin, T-W.; Gras, SL.; Drummond, CJ.; Conn, CE. (2016) “Effect of Lipid-Based Nanostructure on Protein Encapsulation within the Membrane Bilayer Mimetic Lipidic Cubic Phase Using Transmembrane and Lipo-proteins from the Beta-Barrel Assembly Machinery” Langmuir AMER CHEMICAL SOC. pp: 12442-12452. DOI:10.1021/acs.langmuir.6b01800

2015

Journal articles

Bongiovanni, MN.; Gras, SL. (2015) “Bioactive TTR105-115-based amyloid fibrils reduce the viability of mammalian cells” Biomaterials ELSEVIER SCI LTD. pp: 105-116. DOI:10.1016/j.biomaterials.2014.12.039

Go, DP.; Palmer, JA.; Mitchell, GM.; Gras, SL.; O'connor, AJ. (2015) “Porous PLGA microspheres tailored for dual delivery of biomolecules via layer-by-layer assembly” Journal of Biomedical Materials Research Part A WILEY-BLACKWELL. pp: 1849-1863. DOI:10.1002/jbm.a.35319

Kalantar-zadeh, K.; Ou, JZ.; Daeneke, T.; Strano, MS.; Pumera, M.; Gras, SL. (2015) “Two-Dimensional Transition Metal Dichalcogenides in Biosystems” Advanced Functional Materials WILEY-V C H VERLAG GMBH. pp: 5086-5099. DOI:10.1002/adfm.201500891

Meurer, B.; Palmer, M.; Gras, S. (2015) “Innovation hub fuels growth of Australia's dairy industry” Food Australia pp: 42-45.

Nguyen, HTH.; Ong, L.; Beaucher, E.; Madec, M-N.; Kentish, SE.; Gras, SL.; Lopez, C. (2015) “Buffalo milk fat globules and their biological membrane: in situ structural investigations” Food Research International ELSEVIER SCIENCE BV. pp: 35-43. DOI:10.1016/j.foodres.2014.10.022

Nguyen, HTH.; Ong, L.; Kentish, SE.; Gras, SL. (2015) “Homogenisation improves the microstructure, syneresis and rheological properties of buffalo yoghurt” International Dairy Journal ELSEVIER SCI LTD. pp: 78-87. DOI:10.1016/j.idairyj.2014.08.003

Ong, L.; Soodam, K.; Kentish, SE.; Powell, IB.; Gras, SL. (2015) “The addition of calcium chloride in combination with a lower draining pH to change the microstructure and improve fat retention in Cheddar cheese” International Dairy Journal ELSEVIER SCI LTD. pp: 53-62. DOI:10.1016/j.idairyj.2014.07.003

Reynolds, NP.; Charnley, M.; Bongiovanni, MN.; Hartley, PG.; Gras, SL. (2015) “Biomimetic Topography and Chemistry Control Cell Attachment to Amyloid Fibrils” Biomacromolecules AMER CHEMICAL SOC. pp: 1556-1565. DOI:10.1021/acs.biomac.5b00114

Soodam, K.; Ong, L.; Powell, IB.; Kentish, SE.; Gras, SL. (2015) “Effect of rennet on the composition, proteolysis and microstructure of reduced-fat Cheddar cheese during ripening” Dairy Science & Technology SPRINGER FRANCE. pp: 665-686. DOI:10.1007/s13594-015-0250-5

Soodam, K.; Ong, L.; Powell, IB.; Kentish, SE.; Gras, SL. (2015) “Effect of calcium chloride addition and draining pH on the microstructure and texture of full fat Cheddar cheese during ripening” Food Chemistry ELSEVIER SCI LTD. pp: 111-118. DOI:10.1016/j.foodchem.2015.01.135

Takouridis, SJ.; Tribe, DE.; Gras, SL.; Martin, GJO. (2015) “The selective breeding of the freshwater microalga Chlamydomonas reinhardtii for growth in salinity” Bioresource Technology ELSEVIER SCI LTD. pp: 18-22. DOI:10.1016/j.biortech.2014.10.120

Tan, S.; Calani, L.; Bresciani, L.; Dall'asta, M.; Faccini, A.; Augustin, MA.; Gras, SL.; Del Rio, D. (2015) “The degradation of curcuminoids in a human faecal fermentation model” International Journal of Food Sciences and Nutrition TAYLOR & FRANCIS LTD. pp: 790-796. DOI:10.3109/09637486.2015.1095865

Tan, S.; Rupasinghe, TWT.; Tull, DL.; Augustin, MA.; Gras, SL. (2015) “Liquid-liquid extraction and liquid chromatography-mass spectrometry detection of curcuminoids from bacterial culture medium” Journal of Chromatography B ELSEVIER SCIENCE BV. pp: 116-120. DOI:10.1016/j.jchromb.2015.02.024

Van't Hag, L.; Shen, H-H.; Lu, J.; Hawley, AM.; Gras, SL.; Drummond, CJ.; Conn, CE. (2015) “Deconvoluting the Effect of the Hydrophobic and Hydrophilic Domains of an Amphiphilic Integral Membrane Protein in Lipid Bicontinuous Cubic Mesophases” Langmuir AMER CHEMICAL SOC. pp: 12025-12034. DOI:10.1021/acs.langmuir.5b03256

Zhang, L.; Li, X.; Ong, L.; Tabor, RF.; Bowen, BA.; Fernando, AI.; Nilghaz, A.; Garnier, G.; Gras, SL.; Wang, X.; Shen, W. (2015) “Cellulose nanofibre textured SERS substrate” Colloids and Surfaces A: Physicochemical and Engineering Aspects ELSEVIER SCIENCE BV. pp: 309-314. DOI:10.1016/j.colsurfa.2014.12.056

Conference Papers

Burger, W.; Krysiak-baltyn, K.; Scales, PJ.; Martin, GJO.; Stickland, A.; Gras, SL. (2015) “The use of image analysis to characterise activated sludge flocs” APCChE Congress 2015 incorporating Chemeca 2015 Institution of Chemical Engineers. pp: -.

2014

Book chapters

Gras, S.; Claessen, D. (2014) “Functional amyloid fibrils: lessons from microbes”. Havlicek, V.; Spizek, J. (Ed.) Natural Products Analysis: Instrumentation, Methods, and Applications. US. John Wiley & Sons. pp: 573-600. DOI:10.1002/9781118876015.ch16

Journal articles

Go, D.; Harvie, DJ.; Tirtaatmadja, N.; Gras, S.; O'connor, AJ. (2014) “A Simple, Scalable Process for the Production of Porous Polymer Microspheres by Ink-Jetting Combined with Thermally Induced Phase Separation” Particle & Particle Systems Characterization WILEY-V C H VERLAG GMBH. pp: 685-698. DOI:10.1002/ppsc.201300298

Lim, Y.; Barnes, MB.; Gras, S.; Mcsweeney, C.; Lockett, T.; Augustin, M.; Gooley, PR. (2014) “Esterification of high amylose starch with short chain fatty acids modulates degradation by Bifidobacterium spp.” Journal of Functional Foods ELSEVIER SCIENCE BV. pp: 137-146. DOI:10.1016/j.jff.2013.09.027

Lim, Y.; Yao, S.; Gras, S.; Mcsweeney, C.; Lockett, T.; Augustin, M.; Gooley, PR. (2014) “Hydrodynamic radii of solubilized high amylose native and modified starches by pulsed field gradient NMR diffusion measurements” Food Hydrocolloids ELSEVIER SCI LTD. pp: 16-21. DOI:10.1016/j.foodhyd.2014.01.030

Nguyen, H.; Ong, L.; Kentish, SE.; Gras, S. (2014) “The Effect of Fermentation Temperature on the Microstructure, Physicochemical and Rheological Properties of Probiotic Buffalo Yoghurt” Food and Bioprocess Technology SPRINGER. pp: 2538-2548. DOI:10.1007/s11947-014-1278-x

Nguyen, HHT.; Ong, L.; Lefevre, C.; Kentish, SE.; Gras, S. (2014) “The Microstructure and Physicochemical Properties of Probiotic Buffalo Yoghurt During Fermentation and Storage: a Comparison with Bovine Yoghurt” Food and Bioprocess Technology SPRINGER. pp: 937-953. DOI:10.1007/s11947-013-1082-z

Raynes, JK.; Carver, JA.; Gras, S.; Gerrard, JA. (2014) “Protein nanostructures in food - should we be worried?” Trends in Food Science & Technology ELSEVIER SCIENCE LONDON. pp: 42-50. DOI:10.1016/j.tifs.2014.02.003

Sayanjali, S.; Sanguansri, L.; Buckow, R.; Gras, S.; Augustin, MA. (2014) “Oat Fiber As a Carrier for Curcuminoids” Journal of Agricultural and Food Chemistry AMER CHEMICAL SOC. pp: 12172-12177. DOI:10.1021/jf504202w

Soodam, K.; Ong, L.; Powell, IB.; Kentish, SE.; Gras, S. (2014) “The Effect of Milk Protein Concentration on the Microstructure and Textural Properties of Full Fat Cheddar Cheese During Ripening” Food and Bioprocess Technology SPRINGER. pp: 2912-2922. DOI:10.1007/s11947-014-1342-6

Tan, S.; Rupasinghe, TWT.; Tull, DL.; Boughton, B.; Oliver, C.; Mcsweeny, C.; Gras, SL.; Augustin, MA. (2014) “Degradation of Curcuminoids by in Vitro Pure Culture Fermentation” Journal of Agricultural and Food Chemistry AMER CHEMICAL SOC. pp: 11005-11015. DOI:10.1021/jf5031168

Udomprasert, A.; Bongiovanni, M.; Sha, R.; Sherman, WB.; Wang, T.; Arora, PS.; Canary, JW.; Gras, S.; Seeman, NC. (2014) “Amyloid fibrils nucleated and organized by DNA origami constructions” Nature Nanotechnology NATURE PUBLISHING GROUP. pp: 537-541. DOI:10.1038/nnano.2014.102

2013

Book chapters

Sawyer, E.; Gras, S. (2013) “Self-assembling nanomaterials: monitoring the formation of amyloid fibrils, with a focus on Small Angle X-ray Scattering.”. Protein Nanotechnology Protocols, Instrumentation, and Applications, Second Edition. New York. Humana Press. pp: 77-101.

Journal articles

Bongiovanni, M.; Caruso, F.; Gras, SL. (2013) “Lysine functionalised amyloid fibrils: The design and assembly of a TTR1-based peptide” Soft Matter ROYAL SOC CHEMISTRY. pp: 3315-3330. DOI:10.1039/c3sm27244c

Garvey, M.; Meehan, S.; Gras, S.; Schirra, HJ.; Craik, DJ.; Van Der Weerden, NL.; Anderson, MA.; Gerrard, JA.; Carver, JA. (2013) “A radish seed antifungal peptide with a high amyloid fibril-forming propensity” Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics ELSEVIER SCIENCE BV. pp: 1615-1623. DOI:10.1016/j.bbapap.2013.04.030

Ong, L.; Dagastine, RR.; Kentish, SE.; Gras, S. (2013) “Microstructure and Composition of Full Fat Cheddar Cheese Made with Ultrafiltered Milk Retentate” Foods pp: 310-331. DOI:10.3390/foods2030310

Ong, L.; Dagastine, RR.; Kentish, SE.; Gras, S. (2013) “The effect of calcium chloride addition on the microstructure and composition of Cheddar cheese” International Dairy Journal ELSEVIER SCI LTD. pp: 135-141. DOI:10.1016/j.idairyj.2013.03.002

Sawyer, E.; Gras, S. (2013) “Self-assembling Nanomaterials: Monitoring the Formation of Amyloid Fibrils, with a Focus on Small Angle X-ray Scattering” Gerrard, JA. (Ed.) Methods in molecular biology (Clifton, N.J.) US. Humana Press. pp: 77-101. DOI:10.1007/978-1-62703-354-1-5

Shi, Z.; Wedd, AG.; Gras, S. (2013) “Parallel In Vivo DNA Assembly by Recombination: Experimental Demonstration and Theoretical Approaches” Isalan, M. (Ed.) PLoS ONE PUBLIC LIBRARY SCIENCE. pp: 1-16. DOI:10.1371/journal.pone.0056854

Conference Papers

Kuruppath, S.; Kumar, A.; Modepalli, VN.; Ngo, KP.; Gras, SL.; Lefevre, C. (2013) “Buffalo Milk Transcriptomics” 10th World Buffalo Congress and the 7th Asian Buffalo Congress TH. International Buffalo Information Centre. pp: 796-804.

Nguyen, HTH.; Ong, L.; Lefevre, C.; Kentish, SE.; Gras, SL. (2013) “Rheological properties and microstructure of buffalo yoghurt” Nordic Rheology Conference Nordic. pp: 205-211.

2012

Journal articles

Balasuriya, T.; Ong, L.; Gras, S.; Dagastine, RR. (2012) “Changes in morphological and nano-mechanical properties of the milk fat globule membrane during processing” RSC Advances ROYAL SOC CHEMISTRY. pp: 2384-2394. DOI:10.1039/C2RA00844K

Bongiovanni, M.; Puri, DJ.; Goldie, KN.; Gras, S. (2012) “Noncore Residues Influence the Kinetics of Functional TTR105–115-Based Amyloid Fibril Assembly” Journal of Molecular Biology ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD. pp: 256-269. DOI:10.1016/j.jmb.2011.12.020

Go, D.; Hung, A.; Gras, S.; O'connor, AJ. (2012) “Use of a Short Peptide as a Building Block in the Layer-by-Layer Assembly of Biomolecules on Polymeric Surfaces” The Journal of Physical Chemistry B AMER CHEMICAL SOC. pp: 1120-1133. DOI:10.1021/jp208898m

Go, D.; Palmer, JA.; Gras, S.; O'connor, AJ. (2012) “Coating and release of an anti-inflammatory hormone from PLGA microspheres for tissue engineering” Journal of Biomedical Materials Research Part A WILEY-BLACKWELL. pp: 507-517. DOI:10.1002/jbm.a.33299

Healy, J.; Wong, K.; Sawyer, E.; Roux, C.; Domigan, L.; Gras, S.; Sunde, M.; Larsen, N.; Gerrard, J.; Vasudevamurthy, M. (2012) “Polymorphism and higher order structures of protein nanofibers from crude mixtures of fish lens crystallins: Toward useful materials” Biopolymers WILEY-BLACKWELL. pp: 595-606. DOI:10.1002/bip.22045

Ong, L.; Dagastine, RR.; Kentish, SE.; Gras, S. (2012) “The effect of pH at renneting on the microstructure, composition and texture of Cheddar cheese” Food Research International ELSEVIER SCIENCE BV. pp: 119-130. DOI:10.1016/j.foodres.2012.02.020

Rodrigues-perez, J.; Hamley, I.; Gras, S.; Squires, A. (2012) “Local orientational disorder in peptide fibrils probed by a combination of residue-specific 13C-18O labelling, polarised infrared spectroscopy and molecular combing” Chemical Communications ROYAL SOC CHEMISTRY. pp: 11835-11837. DOI:10.1039/c2cc35586h

Sawyer, E.; Claessen, D.; Gras, S.; Perrett, S. (2012) “Exploiting amyloid: how and why bacteria use cross-β fibrils” Biochemical Society Transactions PORTLAND PRESS LTD. pp: 728-734. DOI:10.1042/BST20120013

2011

Book chapters

Gras, S.; Squires, AM. (2011) “Dried and Hydrated X-Ray Scattering Analysis of Amyloid Fibrils”. Hill, AF.; Barnham, KJ.; Bottomley, SP.; Cappai, R. (Ed.) Protein Folding, Misfolding, and Disease Methods and protocols. US. Humana Press. pp: 147-163. DOI:10.1007/978-1-60327-223-0_10

Gras, S.; Waddington, LJ.; Goldie, KN. (2011) “Transmission Electron Microscopy of Amyloid Fibrils”. Hill, AF.; Barnham, KJ.; Bottomley, SP.; Cappai, R. (Ed.) Protein Folding, Misfolding, and Disease Methods and protocols. US. Humana Press. pp: 197-214. DOI:10.1007/978-1-60327-223-0_13

Journal articles

Baldwin, AJ.; Knowles, TPJ.; Tartaglia, GG.; Fitzpatrick, AF.; Devlin, GL.; Shammas, SL.; Waudby, CA.; Mossuto, MF.; Meehan, S.; Gras, S.; Christodoulou, J.; Anthony-cahill, SJ.; Barker, PD.; Vendruscolo, M.; Dobson, CM. (2011) “Metastability of Native Proteins and the Phenomenon of Amyloid Formation” Journal of the American Chemical Society AMER CHEMICAL SOC. pp: 14160-14163. DOI:10.1021/ja2017703

Bongiovanni, MN.; Scanlon, D.; Gras, S. (2011) “Functional fibrils derived from the peptide TTR1-cycloRGDfk that target cell adhesion and spreading” Biomaterials ELSEVIER SCI LTD. pp: 6099-6110. DOI:10.1016/j.biomaterials.2011.05.021

Go, DP.; Gras, S.; Mitra, D.; Nguyen, TH.; Stevens, GW.; Cooper-white, JJ.; O'connor, AJ. (2011) “Multilayered microspheres for the controlled release of growth factors in tissue engineering” Biomacromolecules AMER CHEMICAL SOC. pp: 1494-1503. DOI:10.1021/bm1014574

Gosling, AG.; Stevens, GW.; Barber, AR.; Kentish, SE.; Gras, SL. (2011) “Effect of the Substrate Concentration and Water Activity on the Yield and Rate of the Transfer Reaction of ß-Galactosidase from Bacillus circulans” Journal of Agricultural and Food Chemistry AMER CHEMICAL SOC. pp: 3366-3372. DOI:10.1021/jf104397w

Ong, L.; Dagastine, RR.; Auty, MAE.; Kentish, SE.; Gras, SL. (2011) “Coagulation temperature affects the microstructure and composition of full fat Cheddar cheese” Dairy Science & Technology SPRINGER FRANCE. pp: 739-758. DOI:10.1007/s13594-011-0033-6

Ong, L.; Dagastine, RR.; Kentish, SE.; Gras, S. (2011) “Microstructure of milk gel and cheese curd observed using cryo scanning electron microscopy and confocal microscopy” LWT - Food Science and Technology ELSEVIER SCIENCE BV. pp: 1291-1302. DOI:10.1016/j.lwt.2010.12.026

Sawyer, ES.; Claessen, D.; Haas, MCH.; Hurgobin, B.; Gras, SG. (2011) “The Assembly of Individual Chaplin Peptides from Streptomyces coelicolor into Functional Amyloid Fibrils” Stultz, CM. (Ed.) PLoS ONE PUBLIC LIBRARY SCIENCE. pp: 1-12. DOI:10.1371/journal.pone.0018839

Sen, D.; Gosling, AG.; Stevens, GW.; Bhattacharya, PK.; Barber, AR.; Kentish, SE.; Bhattacharjee, C.; Gras, S. (2011) “Galactosyl oligosaccharide purification by ethanol precipitation” Food Chemistry ELSEVIER SCI LTD. pp: 773-777. DOI:10.1016/j.foodchem.2011.03.076

Sen, D.; Sarkar, A.; Gosling, AG.; Gras, S.; Stevens, GW.; Kentish, SE.; Bhattacharya, PK.; Barber, AR.; Bhattacharjee, C. (2011) “Feasibility study of enzyme immobilization on polymeric membrane: A case study with enzymatically galacto-oligosaccharides production from lactose” Journal of Membrane Science ELSEVIER SCIENCE BV. pp: 471-478. DOI:10.1016/j.memsci.2011.05.032

Sulistio, AP.; Lowenthal, J.; Blencowe, A.; Bongiovanni, MN.; Ong, L.; Gras, S.; Zhang, X. (2011) “Folic Acid Conjugated Amino Acid-Based Star Polymers for Active Targeting of Cancer Cells” Biomacromolecules AMER CHEMICAL SOC. pp: 3469-3477. DOI:10.1021/bm200604h

Wang, Y.; Bongiovanni, M.; Gras, S.; Perrett, S. (2011) “The fibrils of Ure2p homologs from Saccharomyces cerevisiae and Saccharoymyces paradoxus have similar cross-b structure in both dried and hydrated forms” Journal of Structural Biology ACADEMIC PRESS INC ELSEVIER SCIENCE. pp: 505-511. DOI:10.1016/j.jsb.2011.03.008

2010

Journal articles

Go, DPG.; Palmer, JA.; Gras, SG.; O'connor, AJO. (2010) “Delivery of an Anti-Inflammatory Hormone via Layer-by-Layer Assembly of Biomolecules” European Cells and Materials pp: 93-93.

Gosling, A.; Stevens, G.; Barber, .; Kentish, S.; Gras, S. (2010) “Recent advances refining galactooligosaccharide production from lactose” Food Chemistry ELSEVIER SCI LTD. pp: 307-318. DOI:10.1016/j.foodchem.2009.12.063

Mosse, W.; Koppens, M.; Gras, S.; Ducker, W. (2010) “Complexity in Nanoparticle Assembly and Function Obtained by Direct-Grafted Peptides” Langmuir AMER CHEMICAL SOC. pp: 1013-1018. DOI:10.1021/la903466b

Ong, L.; Dagastine, R.; Kentish, S.; Gras, S. (2010) “The Effect of Milk Processing on the Microstructure of the Milk Fat Globule and Rennet Induced Gel Observed Using Confocal Laser Scanning Microscopy” Journal of Food Science WILEY-BLACKWELL. pp: 135-145. DOI:10.1111/j.1750-3841.2010.01517.x

Ong, LO.; Dagastine, RRD.; Kentish, SEK.; Gras, SG. (2010) “Transmission electron microscopy imaging of the microstructure of milk in cheddar cheese production under different processing conditions” Australian Journal of Dairy Technology DAIRY INDUSTRY ASSOC AUSTRALIA. pp: 222-225.

2009

Book chapters

Gras, S. (2009) “Suface- and Solution-Based Assembly of Amyloid Fibrils for Biomedical and Nanotechnology Applications”. Koopmans, RJ. (Ed.) Advances in Chemical Engineering, Engineering Aspects of Self-Organizing Materials. NL (Amsterdam). Elsevier Science. pp: 161-209. DOI:10.1016/S0065-2377(08)00206-8

Journal articles

Garvey, .; Gras, S.; Gerrard, .; Meade, .; Carver, .; Meehan, . (2009) “Protein Nanofibres of Defined Morphology Prepared from Mixtures of Crude Crystallins” International Journal of Nanotechnology INDERSCIENCE ENTERPRISES LTD. pp: 258-273. DOI:10.1504/IJNT.2009.022918

Gosling, A.; Alftren, .; Stevens, G.; Barber, A.; Kentish, S.; Gras, S. (2009) “Facile Pretreatment of Bacilius circulans beta-Galactosidase Increases the Yield of Galactosyl Oligosaccharides in Milk and Lactose Reaction Systems” Journal of Agricultural and Food Chemistry AMER CHEMICAL SOC. pp: 11570-11574. DOI:10.1021/jf9018596

Han, .; Gareth, .; Gras, S. (2009) “Binding Properties of Peptidic Affinity Ligands for Plasmid DNA Capture and Detection” AIChE Journal WILEY. pp: 505-515. DOI:10.1002/aic.11690

Mosse, W.; Koppens, M.; Gengenbach, .; Scanlon, D.; Gras, S.; Ducker, W. (2009) “Peptides Grafted from Solids for the Control of Interfacial Properties” Langmuir AMER CHEMICAL SOC. pp: 1488-1494. DOI:10.1021/la802864v

Pham, C.; Leong, SL.; Ali, F.; Kenche, V.; Hill, A.; Gras, S.; Barnham, K.; Cappai, R. (2009) “Dopamine and the Dopamine Oxidation Product5,6-Dihydroxylindole Promote Distinct On-Pathway and Off-Pathway Aggregation of α-Synuclein in a pH-Dependent Manner.” Journal of Molecular Biology ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD. pp: 771-785. DOI:10.1016/j.jmb.2009.02.007

2008

Journal articles

Gras, S.; Tickler, .; Squires, .; Devlin, .; Horton, .; Dobson, .; Macphee, . (2008) “Functionalised Amyloid Fibrils for Roles in Cell Adhesion” Biomaterials ELSEVIER SCI LTD. pp: 1553-1562. DOI:10.1016/j.biomaterials.2007.11.028

2007

Journal articles

Gras, S. (2007) “Nanotechnology using non-native protein structures” Chemistry in Australia pp: 11-13.

Gras, S. (2007) “Protein misfolding: a route to new nanomaterials” Advanced Powder Technology BRILL ACADEMIC PUBLISHERS. pp: 699-705. DOI:10.1163/156855207782515085

Gras, S. (2007) “Amyloid fibrils: From disease to design. New biomaterial applications for self-assembling cross-beta fibrils” Australian Journal of Chemistry CSIRO PUBLISHING. pp: 333-342. DOI:10.1071/CH06485

Gras, S.; Mahmud, T.; Rosengarten, G.; Mitchell, A.; Kalantar-zadeh, K. (2007) “Intelligent control of surface hydrophobicity” ChemPhysChem WILEY-V C H VERLAG GMBH. pp: 2036-2050. DOI:10.1002/cphc.200700222

Conference Papers

Gras, S. (2007) “Protein aggregation: The good, the bad and the ugly” Chemeca 07 AU. Institution of Engineers Australia. pp: 28-32.

Mahmud, T.; Wlodarski, W.; Mitchell, A.; Gras, S.; Trinchi, A.; Kalantar-zadeh, K. (2007) “Electrochemical release of immobilized IgG protein” pp: 94-99.

Mahmud, T.; Wlodarski, W.; Mitchell, A.; Gras, S.; Trinchi, A.; Kalantar-zadeh, K. (2007) “Electrochemical release of Immobilized IgG Protein” 2007 MRS Spring Meeting: Symposium V US (Pennsylvania). Materials Research Society. pp: 1-6.

2006

Journal articles

Devlin, G.; Knowles, T.; Squires, A.; Mccammon, M.; Gras, SL.; Nilsson, M.; Robinson, C.; Dobson, C.; Macphee, C. (2006) “The component polypeptide chains of bovine insulin nucleate or inhibit aggregation of the parent protein in a conformation-dependent manner” Journal of Molecular Biology ACADEMIC PRESS LTD ELSEVIER SCIENCE LTD. pp: 497-509. DOI:10.1016/j.jmb.2006.05.007

Squires, A.; Devlin, G.; Gras, SL.; Tickler, A.; Macphee, C.; Dobson, C. (2006) “X-Ray scattering study of the effect of hydration on the cross-beta structure of amyloid fibrils” Journal of the American Chemical Society AMER CHEMICAL SOC. pp: 11738-11739. DOI:10.1021/ja063751v

Conference Papers

Gras, S.; Squires, A.; Dobson, C. (2006) “Functionalised Fibrils for Bio-Nanotechnology” ICONN 06 US (Piscataway). IEEE - Institute of Electrical and Electronic Engineers. pp: 1-9. DOI:10.1109/ICONN.2006.340589

2005

Journal articles

Thorn, D.; Meehan, S.; Sunde, M.; Rekas, A.; Gras, SL.; Macphee, C.; Dobson, C.; Wilson, M.; Carver, J. (2005) “Amyloid fibril formation by bovine milk kappa-casein and its inhibition by the molecular chaperones alpha(S)- and beta-Casein” Biochemistry AMER CHEMICAL SOC. pp: 17027-17036. DOI:10.1021/bi051352r